BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007E09LP1|AL425714
(815 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1686 1340 0.0
>3x_Contig1686
Length = 15382
Score = 1340 bits (675), Expect = 0.0
Identities = 693/699 (99%), Gaps = 1/699 (0%)
Strand = Plus / Plus
Query: 117 ccgcgcggcttgccaaggaaatctaatccccatatatcgcatttctgacaccgagagacc 176
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 11560 ccgcgcggcttgccaagggaatctaatccc-atatatcgcatttctgacaccgagagacc 11618
Query: 177 gtattaactattctcatgcgcaaacggttaaaagatgtagaatttctacattgtgctaac 236
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 11619 gtattaactattctcatgcgcaaacggttaaaagatgtagaattcctacattgtgctaac 11678
Query: 237 atgctggagaggatagctccaaaaaaatttacccaacgcagtagtagcagcggtacactt 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11679 atgctggagaggatagctccaaaaaaatttacccaacgcagtagtagcagcggtacactt 11738
Query: 297 gcttaaagcctaccagaaaatatgtcaacaaccttcagcgtcacctgatggaaatcgacg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11739 gcttaaagcctaccagaaaatatgtcaacaaccttcagcgtcacctgatggaaatcgacg 11798
Query: 357 tcttgttttttttttcttttccgtatttttctggcagttgtyatggcatttgtttacttt 416
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 11799 tcttgttttttttttcttttccgtatttttctggcagttgtcatggcatttgtttacttt 11858
Query: 417 tttccttcgtacagatgttattatgactttgaactaaccgatttttcgattttcattctg 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11859 tttccttcgtacagatgttattatgactttgaactaaccgatttttcgattttcattctg 11918
Query: 477 tcacagcacgatctcttagaataaacacacaaaaacgaaatgaaagatgtgaaatcaaac 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11919 tcacagcacgatctcttagaataaacacacaaaaacgaaatgaaagatgtgaaatcaaac 11978
Query: 537 cagttaagctgcgaataatggtaatagattccttagtcatcttcactatatcggtttatt 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11979 cagttaagctgcgaataatggtaatagattccttagtcatcttcactatatcggtttatt 12038
Query: 597 cgtaactagcggggtttctttcccctccatttcgaatcacacttcaatggtgttttgttt 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12039 cgtaactagcggggtttctttcccctccatttcgaatcacacttcaatggtgttttgttt 12098
Query: 657 ttcagaatatgcctctgtatcggtaataacagtagtgccttttggatttctgtttaaaaa 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12099 ttcagaatatgcctctgtatcggtaataacagtagtgccttttggatttctgtttaaaaa 12158
Query: 717 tatctcttttaagtgatgatgtkcttctccacctgcatactataacatcgtactgtcgag 776
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 12159 tatctcttttaagtgatgatgttcttctccacctgcatactataacatcgtactgtcgag 12218
Query: 777 tgtacatagtagtagtatttttttcggttacatgtatat 815
| |||||||||||||||||||||||||||||||||||||
Sbjct: 12219 tttacatagtagtagtatttttttcggttacatgtatat 12257
Score = 99.8 bits (50), Expect = 8e-21
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 5 ggggaaaagggtccccttcgcctaaatttcatcggaaagtgattttgaaaaaagacgaag 64
|||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 11450 ggggcaaagggaccccttcgcctaaatttcatcggaaagtgattttgaaaccagacgaag 11509
Query: 65 ccagaaatcaaagggaaaaaaa 86
||||| ||| ||||||||||
Sbjct: 11510 ccagatatccccgggaaaaaaa 11531
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8169
Number of Sequences: 1807
Number of extensions: 8169
Number of successful extensions: 108
Number of sequences better than 1.0e-20: 1
length of query: 815
length of database: 10,358,551
effective HSP length: 16
effective length of query: 799
effective length of database: 10,329,639
effective search space: 8253381561
effective search space used: 8253381561
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)